1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...tggctccctttatcttatcatacctcgattagactgatctacattgtttcgagtaagatattgcacgagatagttgacatcgtagacttggcttttgcagACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGGTGCTGGTAGGCACTCAGGGCGGTGCGAGGGCTTTGAGCCTTTCTTACCA
species | Physcomitrella patens |
transcript | PP1S78_54V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GTAGGGGTTCCAGGACCCGTACACGATGAACGCGGGACCTTCAGGATTCC ACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGGEST: gi|100372841|gb|BY948727.1|BY948727
genomic: GTAGGGGTTCCAGGACCCGTACACGATGAACGCGGGACCTTCAGGATTCCgtaagccagt ... gcttttgcagACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGG
EST: GTAGGGGTTCCAGGACCCGTACACGATGAACGCGGGACCTTCAGGATTCC ACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGGEST: gi|18370210|gb|BJ201812.1|BJ201812
genomic: GTAGGGGTTCCAGGACCCGTACACGATGAACGCGGGACCTTCAGGATTCCgtaagccagt ... gcttttgcagACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGG
EST: GTAGGGGTTCCAGGACCCGTACACGATGAACGCGGGACCTTCAGGATTCC ACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGG
genomic: GTAGGGGTTCCAGGACCCGTACACGATGAACGCGGGACCTTCAGGATTCCgtaagccagt ... gcttttgcagACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGG
gtttcgagtaagatattgcacgagatagttgacatcgtagacttggcttttgcagACAATGCCCCTGTGACCAAGGCAATAGTGATGGCGTGTGGTCTGGCTTCGGTGCTGGTAGGCACTCAGGGCGGTGCGAGGGCTTTGAGCCTTTCTTACCA
agttgac putative branch site (score: 3)
cttttgc putative PPT
taagatatt TA-rich tract