1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtatgtatattttcatcatttgcatggcggggtcatgggatatgatagtctggtcttagtaactggtttaaactcataaaatgaaattgcgtgggtgctgtatttgaaagggcagtctccggtttggtgacctgatgaggaactcggtatgccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCGTGGTGGACAGTAACGACAGAGATCGTGTTGTGGAAGCTAGGGATGAGC
species | Physcomitrella patens |
transcript | PP1S70_131V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208355961|gb|DC926680.1|DC926680
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208382824|gb|DC923871.1|DC923871
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18363226|gb|BJ195298.1|BJ195298
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCEST: gi|19788683|gb|BQ040855.1|BQ040855
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18360326|gb|BJ192388.1|BJ192388
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67508415|gb|BJ941282.1|BJ941282
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67697597|gb|BJ957830.1|BJ957830
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|37841109|gb|BJ599117.1|BJ599117
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18359906|gb|BJ191967.1|BJ191967
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|37845648|gb|BJ603656.1|BJ603656
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67574235|gb|BJ947059.1|BJ947059
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208347716|gb|DC912905.1|DC912905
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGANGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGANTTTCEST: gi|37831694|gb|BJ589706.1|BJ589706
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|37844007|gb|BJ602015.1|BJ602015
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67578337|gb|BJ950504.1|BJ950504
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|162261371|gb|FC437804.1|FC437804
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|37827495|gb|BJ585507.1|BJ585507
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATA-AAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18355084|gb|BJ187143.1|BJ187143
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208363816|gb|DC943273.1|DC943273
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18362214|gb|BJ194284.1|BJ194284
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|162245120|gb|FC421594.1|FC421594
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18348203|gb|BJ180250.1|BJ180250
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATA-AAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18373510|gb|BJ205088.1|BJ205088
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|162261370|gb|FC437803.1|FC437803
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|22492640|gb|BU052563.1|BU052563
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208380989|gb|DC919871.1|DC919871
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|162219183|gb|FC396622.1|FC396622
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67697639|gb|BJ957872.1|BJ957872
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18354876|gb|BJ186935.1|BJ186935
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67695107|gb|BJ955340.1|BJ955340
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|22132696|gb|BQ827292.1|BQ827292
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCCCCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18374183|gb|BJ205761.1|BJ205761
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18365521|gb|BJ197598.1|BJ197598
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208349858|gb|DC905982.1|DC905982
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18357362|gb|BJ189421.1|BJ189421
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|162245687|gb|FC420731.1|FC420731
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18328134|gb|BJ160138.1|BJ160138
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208386273|gb|DC952986.1|DC952986
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: ATACAAGAACATTAGTTTCACCGTTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|37831484|gb|BJ589496.1|BJ589496
genomic: ATACAAGAACATTAGTTTCACCG-TTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67574196|gb|BJ947020.1|BJ947020
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18363945|gb|BJ196017.1|BJ196017
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67701220|gb|BJ961453.1|BJ961453
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|67700135|gb|BJ960368.1|BJ960368
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|37844741|gb|BJ602749.1|BJ602749
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18336372|gb|BJ168394.1|BJ168394
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|18334356|gb|BJ166373.1|BJ166373
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|208351622|gb|DC910024.1|DC910024
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCEST: gi|37853307|gb|BJ611315.1|BJ611315
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
EST: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAG ATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
genomic: AATACAAGAACATTAGTTTCACCGTTTGGGATGTCGGAGGTCAGGACAAGgtatgtatat ... gccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTC
gaaagggcagtctccggtttggtgacctgatgaggaactcggtatgccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCGTGGTGGACAGTAACGACAGAGATCGTGTTGTGGAAGCTAGGGATGAGC
acctgat putative branch site (score: 112)
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgtatattttcatcatttgcatggcggggtcatgggatatgatagtctggtcttagtaactggtttaaactcataaaatgaaattgcgtgggtgctgtatttgaaagggcagtctccggtttggtgacctgatgaggaactcggtatgccttgacagATCCGGCCACTGTGGAGGCATTACTTCCAGAACACTCAAGGGCTGATTTTCGTGGTGGACAGTAACGACAGAGATCGTGTTGTGGAAGCTAGGGATGAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG