1 5' 3' | 2 5' 3' |
gtaatcttcaaagctcgaagtctctcaagcttgagaatcatatgagtcagtctcttttcatgcatccaacgcattgacacaatcgagacggattttcgttgcagGGGCGAGACACGCAATCCGTGAAGGCCAGGGTACCGGAGTCCATAGATATGCTACCGGAGAGTAGCTTAGATCGAAGGGAATTTGACAAGGATTTTCTCG
species | Physcomitrella patens |
transcript | PP1S55_49V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCCTGAGAGCAGGCTCGTCTTCTTCGTCTCTCGTACCTCCAGCTGTGAAG GGGCGAGACACGCAATCCGTGAAGGCCAGGGTACCGGAGTCCATAGATATG
genomic: CCCTGAGAGCAGGCTCGTCTTCTTCGTCTCTCGTACCTCCAGCTGTGAAGgtaatcttca ... ttcgttgcagGGGCGAGACACGCAATCCGTGAAGGCCAGGGTACCGGAGTCCATAGATATG
gtctcttttcatgcatccaacgcattgacacaatcgagacggattttcgttgcagGGGCGAGACACGCAATCCGTGAAGGCCAGGGTACCGGAGTCCATAGATATGCTACCGGAGAGTAGCTTAGATCGAAGGGAATTTGACAAGGATTTTCTCG
cattgac putative branch site (score: 4)
ttttcgtt putative PPT
ttttcat TA-rich tract