1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatgttctttcaaaacttctcctctgccatttttctgataatcaaagttggaaaaagcacaataatcccttgaagaacttatgtagatgtctgtatccacatttagaatgtctaactgctttcaatcacaaacttaaaatatccatactaaaataatgtggtaatgtgtcacttagAAAAGGTGCGACCAGCAACGGATGCGACTCCACCGATCGCTTTATGTACGAGCCCAAACACCTTCCCCTTCTAACGACGATAATCAGGTCTCTCCAGAGA
species | Physcomitrella patens |
transcript | PP1S55_203V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CTTGCACTCTTAATCCCTTCTATAACTCGAGACATCTGCTAGTTGAGACG AAAAGGTGCGACCAGCAACGGATGCGACTCCACCGATCGCTTTATGTACGAEST: gi|162176955|gb|FC353632.1|FC353632
genomic: CTTGCACTCTTAATCCCTTCTATAACTCGAGACATCTGCTAGTTGAGACGgtatgttctt ... tgtcacttagAAAAGGTGCGACCAGCAACGGATGCGACTCCACCGATCGCTTTATGTACGA
EST: CTTGCACTCTTAATCCCTTCTATAACTCGAGACATCTGCTAGTTGAGACG AAAAGGTGCGACCAGCAACGGATGCGACTCCACCGATCGCTTTATGTACGA
genomic: CTTGCACTCTTAATCCCTTCTATAACTCGAGACATCTGCTAGTTGAGACGgtatgttctt ... tgtcacttagAAAAGGTGCGACCAGCAACGGATGCGACTCCACCGATCGCTTTATGTACGA
tcaatcacaaacttaaaatatccatactaaaataatgtggtaatgtgtcacttagAAAAGGTGCGACCAGCAACGGATGCGACTCCACCGATCGCTTTATGTACGAGCCCAAACACCTTCCCCTTCTAACGACGATAATCAGGTCTCTCCAGAGA
tactaaa putative branch site (score: 1)
aaacttaaaatatcca TA-rich tract