1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgggtttcacagaagtgcctgaagctttgaggcatactcctttggtatctgatcttgatttatctattttgtttcaagtggatttggaagagtagattgcgagtcctaacaacacgtcattgtctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG
species | Physcomitrella patens |
transcript | PP1S4_215V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|162235910|gb|FC411653.1|FC411653
genomic: TTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAANAGAEST: gi|18333863|gb|BJ165879.1|BJ165879
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|208355802|gb|DC929983.1|DC929983
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGANGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|162238939|gb|FC417703.1|FC417703
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|208371352|gb|DC944516.1|DC944516
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|100357608|gb|BY946481.1|BY946481
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCGGGTCGTTGTTGGAGGCAGGATTTGATGCCCCATAA-CGAAAAGEST: gi|162199675|gb|FC375914.1|FC375914
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCC-ATAAACGAAAAG
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|67696462|gb|BJ956695.1|BJ956695
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|162238938|gb|FC417702.1|FC417702
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: TCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|162264333|gb|FC440499.1|FC440499
genomic: TCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|162235909|gb|FC411652.1|FC411652
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: CCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGAEST: gi|162199674|gb|FC375913.1|FC375913
genomic: CCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
EST: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAG TCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
genomic: GCGGAAGACTACTCCACGATTCTGCTCTTCGCCACTGGTTCTGGAATTAGgtgggtttca ... tctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGA
gtggatttggaagagtagattgcgagtcctaacaacacgtcattgtctacgacagTCCAATCCGGTCGTTGTTGGAGGCAGGATTTGATGCCCATAAACGAAAAGACGTGCGTCTATATTATGGTGCTCGCAACCTAGACCGAATGTCATACCAG
tcctaac putative branch site (score: 1)