1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...tattgaggttgtgcatgagaaccaatcgaatgcagttattaacaactattcattcattcacgggactaaaacttagcatgttgttttgggtgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTCCTGCAAATGGTAAAAACAAGACACCAGTGGTACAGTATGGGTTAACGT
species | Physcomitrella patens |
transcript | PP1S49_289V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|100366441|gb|BY985136.1|BY985136
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCAGGGATGAGTEST: gi|162156192|gb|FC332567.1|FC332567
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|100430914|gb|BY959933.1|BY959933
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAGAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|100422753|gb|BY957983.1|BY957983
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|100378919|gb|BY986483.1|BY986483
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|18347724|gb|BJ179771.1|BJ179771
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|100353366|gb|BY964770.1|BY964770
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|162237927|gb|FC412528.1|FC412528
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTEST: gi|162158209|gb|FC335252.1|FC335252
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
EST: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAG GTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
genomic: AGGCACTCTCGTTGTGGGGCGGTTGTGCGAAGGACTCGGAAAATTTACAGgtgaatttgg ... tgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGT
ctattcattcattcacgggactaaaacttagcatgttgttttgggtgtatgcaagGTGCATGTGTCATTAGCGGGGGCAAAGCACATGAGAGTATCATGGATGAGTCCTGCAAATGGTAAAAACAAGACACCAGTGGTACAGTATGGGTTAACGT
gactaaa putative branch site (score: 2)
taaaactta TA-rich tract