1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtacggaatgtatactccgacacttttttttcggcactttttgcatttttatcgcgtggtataacagcgaaaattgcactcttcaatttacaagcactgtcatatattctccacatacattgttctgtctttttttctgattgtatcgtgaatggcagGAGTCGAGGGAGGTTTCGATTCTAAAGTACCCGAGTACGAAGAGACCTATCGCATTGTTATATTGCCGGACTTTATCTCACTTTTGTATCCTAGTGTGGA
species | Physcomitrella patens |
transcript | PP1S495_6V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCAAGTCAGCGAGAGCCGGCCACATAAGAAACCAACACTGTTAGCTATTG GAGTCGAGGGAGGTTTCGATTCTAAAGTACCCGAGTACGAAGAGACCTATCEST: gi|18368916|gb|BJ201001.1|BJ201001
genomic: GCAAGTCAGCGAGAGCCGGCCACATAAGAAACCAACACTGTTAGCTATTGgtacggaatg ... tgaatggcagGAGTCGAGGGAGGTTTCGATTCTAAAGTACCCGAGTACGAAGAGACCTATC
EST: GCAAGTCAGCGAGAGCCGGCCACATAAGAAACCAACACTGTTAGCTATTG GAGTCGAGGGAGGTTTCGATTCTAAAGTACCCGAGTACGAAGAGACCTATC
genomic: GCAAGTCAGCGAGAGCCGGCCACATAAGAAACCAACACTGTTAGCTATTGgtacggaatg ... tgaatggcagGAGTCGAGGGAGGTTTCGATTCTAAAGTACCCGAGTACGAAGAGACCTATC
atattctccacatacattgttctgtctttttttctgattgtatcgtgaatggcagGAGTCGAGGGAGGTTTCGATTCTAAAGTACCCGAGTACGAAGAGACCTATCGCATTGTTATATTGCCGGACTTTATCTCACTTTTGTATCCTAGTGTGGA
ttctgat putative branch site (score: 5)
tcttttttt TA-rich tract