1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtgagcatcactctctgctttcgtgtgaaatatatatatatatatatatatatatatatatatttatactcatattttctctaagagttttcacttcaggtcgaggatttgtcttgcttggttcttttagatttgattagagtgtgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGTTTATTCAGCGGACATATCCAATTCATCCCATCATGATGGCGGTGGCGC
species | Physcomitrella patens |
transcript | PP1S495_13V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGA GTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGEST: gi|162231669|gb|FC408262.1|FC408262
genomic: CATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGAgtgagcatca ... tgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAG
EST: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGA GTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGEST: gi|162231668|gb|FC408261.1|FC408261
genomic: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGAgtgagcatca ... tgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAG
EST: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGA GTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGEST: gi|162171757|gb|FC348426.1|FC348426
genomic: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGAgtgagcatca ... tgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAG
EST: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGA GTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGEST: gi|37851278|gb|BJ609286.1|BJ609286
genomic: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGAgtgagcatca ... tgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAG
EST: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGA GTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGEST: gi|18335242|gb|BJ167260.1|BJ167260
genomic: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGAgtgagcatca ... tgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAG
EST: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGA GTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGEST: gi|162195066|gb|FC368780.1|FC368780
genomic: GGCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGAgtgagcatca ... tgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAG
EST: GCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAAGGA GTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCA
genomic: GCACAGTCACATGGGATGGTTACTGGATGACAGAAGAACTCAAGAAA-GAgtgagcatca ... tgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCA
gtcgaggatttgtcttgcttggttcttttagatttgattagagtgtgtctggcagGTCGGGGCTCGGAATAACGTTGGTGACATGGACAAAGATCCTTTTTATCAGTTTATTCAGCGGACATATCCAATTCATCCCATCATGATGGCGGTGGCGC
atttgat putative branch site (score: 21)
ttttagatttgatta TA-rich tract