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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gatttgtagcaataccctctgtttttatttgtattcttctcgtgagatagttggttcgtacccctgatccaaagtggagtgattacatcgactcttgcagGTACTCGCTGCAAGGAGCAACATTGATCACTAAAGATCTCTTTGCATTTCCTGGACATCAACTATTGCTAAGTTTTTTGTTGTATAATATGATGATACAA

Basic information

species Physcomitrella patens
transcript PP1S494_7V6.2
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gatagttggttcgtacccctgatccaaagtggagtgattacatcgactcttgcagGTACTCGCTGCAAGGAGCAACATTGATCACTAAAGATCTCTTTGCATTTCCTGGACATCAACTATTGCTAAGTTTTTTGTTGTATAATATGATGATACAA
                ccctgat  putative branch site (score: 4)
                                              ctcttgc  putative PPT
                                    attacat  TA-rich tract