1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagcttattcattcttggttttgtttactctaatctctggtgtccttgtttttaagctactttatcgatcaagattctgtctcatactcatgatcacatataatttccttttggagacattacaattgcctctttgtcacgtccaccgggactcatcctagaatcggcttcgtcttcgtttattgtagAGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAACACTGAGAGTGTCATGCGATTGTCATGGGCTCTTGTCCATTCACGAAATG
species | Physcomitrella patens |
transcript | PP1S48_19V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: NNNNNGGGGGAGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCT AGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAACEST: gi|162174327|gb|FC350398.1|FC350398
genomic: TTTTTGGGGGAGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCTgtaagcttat ... tttattgtagAGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAAC
EST: GGGGGAGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCT AGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAACEST: gi|22132286|gb|BQ827078.1|BQ827078
genomic: GGGGGAGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCTgtaagcttat ... tttattgtagAGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAAC
EST: NNNNNGGGGGAGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCT AGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAACEST: gi|162174326|gb|FC350397.1|FC350397
genomic: TTTTTGGGGGAGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCTgtaagcttat ... tttattgtagAGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAAC
EST: AGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCT AGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAAC
genomic: AGGCGACTATTTGCCGTGGACAGACTCAGAAATGATTGCTgtaagcttat ... tttattgtagAGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAAC
ttgtcacgtccaccgggactcatcctagaatcggcttcgtcttcgtttattgtagAGCTGTGAATTGGAAGCTTCTTGTGAAAAGGCTGCTGCACCCAGTGAGAACACTGAGAGTGTCATGCGATTGTCATGGGCTCTTGTCCATTCACGAAATG
cttcgtcttcgttt CT-rich tract
tttattgta TA-rich tract