1 5' 3' | 2 5' 3' |
...taatcagttttgtccagttttcccgtacttttcaactcatgatagtcgatattatttggtaaatatccttatcttgatcttactgcttttttgggaatagGTGAAGCGTATGATCAAGTGACTGAGATGTGCATCTATCTCTTCCACGAAGCGTCCATCCCAGCCGACAAAGCAGTAGCAGTCTACGTTCAATCTCCAGG
species | Physcomitrella patens |
transcript | PP1S47_70V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CACCCAAGTTGACACTCAGAAATGGCTTCTGAACATGGATATTTTTGTTG GTGAAGCGTATGATCAAGTGACTGAGATGTGCATCTATCTCTTCCACGAAGEST: gi|19783974|gb|BQ040097.1|BQ040097
genomic: CACCCAAGTTGACACTCAGAAATGGCTTCTGAACATGGATATTTTTGTTGgtgagtttgg ... ttgggaatagGTGAAGCGTATGATCAAGTGACTGAGATGTGCATCTATCTCTTCCACGAAG
EST: CACCCAAGTTGACACTCAGAAATGGCTTCTGAACATGGATATTTTTGTTG GTGAAGCGTATGATCAAGTGACTGAGATGTGCATCTATCTCTTCCACGAAG
genomic: CACCCAAGTTGACACTCAGAAATGGCTTCTGAACATGGATATTTTTGTTGgtgagtttgg ... ttgggaatagGTGAAGCGTATGATCAAGTGACTGAGATGTGCATCTATCTCTTCCACGAAG
tcgatattatttggtaaatatccttatcttgatcttactgcttttttgggaatagGTGAAGCGTATGATCAAGTGACTGAGATGTGCATCTATCTCTTCCACGAAGCGTCCATCCCAGCCGACAAAGCAGTAGCAGTCTACGTTCAATCTCCAGG
atcttac putative branch site (score: 10)
tcttactgctttttt CT-rich tract
attatttggtaaatat TA-rich tract