1 5' 3' | 2 5' 3' |
gtatattctaattccttatccttgacagatcctaccgttattttctcccattatcgaccgatttcttgttcgaatgtcaggtttgttcacggctgacttactgaattttgtgatggtaattacagGTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATATACAACCCGGTCGATAAGACCATGCCCAAGGATCTCCTTAAGTCACTGCA
species | Physcomitrella patens |
transcript | PP1S46_76V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTNTATCTG GTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATATEST: gi|162232379|gb|FC408306.1|FC408306
genomic: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTTTATCTGgtatattcta ... gtaattacagGTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATAT
EST: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTTTATCTG GTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATATEST: gi|162241579|gb|FC415507.1|FC415507
genomic: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTTTATCTGgtatattcta ... gtaattacagGTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATAT
EST: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTTTATCTG GTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATATEST: gi|162203581|gb|FC379067.1|FC379067
genomic: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTTTATCTGgtatattcta ... gtaattacagGTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATAT
EST: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTTTATCTG GTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATAT
genomic: TACATTCGCACAGCAGGGATTGAACACGGAAGATATGGTAGTTTTATCTGgtatattcta ... gtaattacagGTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATAT
cgaatgtcaggtttgttcacggctgacttactgaattttgtgatggtaattacagGTGCCCATACAATCGGAGTCACCCACTGCAACCATATAAGCGACAGGATATACAACCCGGTCGATAAGACCATGCCCAAGGATCTCCTTAAGTCACTGCA
gacttac putative branch site (score: 2)
tgaatttt TA-rich tract