1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaagcctctctctccctctcgccctctccctctctctctttttctagggttttttgattatgcataagttgagcaatggcgggggtctatgctgagtagaacatctactattaggaacattcccctgttgtacggagttatgtgtttagatccacttaatttgtaaatcgaaaattgccgtgtacagGAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACGATGTCTGTGAAAAACAACACTCAG
species | Physcomitrella patens |
transcript | PP1S46_237V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGCAAGGCCGATGGAGGAGGACACT GAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACGEST: gi|162224435|gb|FC399811.1|FC399811
genomic: TGCAAGGCCGATGGAGGAGGACACTgtaagcctct ... ccgtgtacagGAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACG
EST: TGCAAGGCCGATGGAGGAGGACACT GAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACGEST: gi|67696374|gb|BJ956607.1|BJ956607
genomic: TGCAAGGCCGATGGAGGAGGACACTgtaagcctct ... ccgtgtacagGAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACG
EST: TGCAAGGCCGATGGAGGAGGACACT GAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACGEST: gi|67572995|gb|BJ945819.1|BJ945819
genomic: TGCAAGGCCGATGGAGGAGGACACTgtaagcctct ... ccgtgtacagGAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACG
EST: TGCAAGGCCGATGGAGGAGGACACT GAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACG
genomic: TGCAAGGCCGATGGAGGAGGACACTgtaagcctct ... ccgtgtacagGAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACG
cggagttatgtgtttagatccacttaatttgtaaatcgaaaattgccgtgtacagGAAAAGACGGAGGAGGAGGAGTTCTCCACTGGTCCGCTGTCCGTCCTTACGATGTCTGTGAAAAACAACACTCAG
acttaat putative branch site (score: 24)
ttaatttgtaaatcga TA-rich tract