1 5' 3' | 2 5' 3' | 3 5' 3' |
gtgcgtacaaatcatccgggttaagaatatacaaagttaaaatctcataatcattcatagtgaataatgaacttgcgagcagaaagcacgcaaaattgtagcatagatttcaaaccacctttgatttatgattgctcgtttgattgttttttgtacccctgtgtgtggtcttaacttgtacgtacaactgcgtgcaatagGTACATCAATAAACGCTACAAGCGCCACTTGGTCCATATTGTGTCTCGGAACGATATCGTGCCTAAGGTGATGCCGGTTGCTTTCACGATTTACACCATT
species | Physcomitrella patens |
transcript | PP1S42_138V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ATTTGGTTGCCCATTCTTCGCAGACTACCGTCTCGCGAG GTACATCAATAAACGCTACAAGCGCCACTTGGTCCATATTGTGTCTCGGAAEST: gi|162153564|gb|FC329632.1|FC329632
genomic: ATTTGGTTGCCCATTCTTCGCAGACTACCGTCTCGCGAGgtgcgtacaa ... cgtgcaatagGTACATCAATAAACGCTACAAGCGCCACTTGGTCCATATTGTGTCTCGGAA
EST: CAGTGCTACACATTTGGTTGCCCATTCTTCGCAGACTACCGTCTCGCGAG GTACATCAATAAACGCTACAAGCGCCACTTGGTCCATATTGGGTCTCGGAA
genomic: CAGTGCTACACATTTGGTTGCCCATTCTTCGCAGACTACCGTCTCGCGAGgtgcgtacaa ... cgtgcaatagGTACATCAATAAACGCTACAAGCGCCACTTGGTCCATATTGTGTCTCGGAA
gttttttgtacccctgtgtgtggtcttaacttgtacgtacaactgcgtgcaatagGTACATCAATAAACGCTACAAGCGCCACTTGGTCCATATTGTGTCTCGGAACGATATCGTGCCTAAGGTGATGCCGGTTGCTTTCACGATTTACACCATT
tcttaac putative branch site (score: 4)
ttaactt TA-rich tract