Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tctctcaaaactataagggttttcattgtatgacattttttctgttacctgtacgtcataactaccttaagactacagatatgaaatttctgtgtgtaagGGAGACATTCCCAGAAAGGCACTGCTTACATCGGCGGTGTCCTTCATGGTTCGATGGCTTGCTCAACAACTAAAGTTGCTTCATACTTTTTGCCTCCACA

Basic information

species Physcomitrella patens
transcript PP1S427_30V6.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tacctgtacgtcataactaccttaagactacagatatgaaatttctgtgtgtaagGGAGACATTCCCAGAAAGGCACTGCTTACATCGGCGGTGTCCTTCATGGTTCGATGGCTTGCTCAACAACTAAAGTTGCTTCATACTTTTTGCCTCCACA
          tcataac  putative branch site (score: 2)
                                         tttctgt  putative PPT
                                 atatgaaattt  TA-rich tract