1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaagctgctgataatttttccctttgcactgtatatttgtttttaaatacactgacacatacacaccaggtttcgtctattgactagtttggggggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCTCGGCGCTTTGTCACAAATTATCGACCCCGATTTTGGGACGGACATTGT
species | Physcomitrella patens |
transcript | PP1S414_7V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAG ACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCEST: gi|100433006|gb|BY978774.1|BY978774
genomic: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAGgtaagctgct ... gggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
EST: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAG ACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCEST: gi|162255253|gb|FC431563.1|FC431563
genomic: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAGgtaagctgct ... gggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
EST: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAG ACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCEST: gi|208392653|gb|DC933997.1|DC933997
genomic: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAGgtaagctgct ... gggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
EST: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAG ACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCEST: gi|100363772|gb|BY947610.1|BY947610
genomic: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAGgtaagctgct ... gggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
EST: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAG ACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCEST: gi|162258151|gb|FC433933.1|FC433933
genomic: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAGgtaagctgct ... gggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
EST: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAG ACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCEST: gi|162173761|gb|FC349937.1|FC349937
genomic: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAGgtaagctgct ... gggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
EST: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAG ACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
genomic: ACTTGTTTTGGCAATGAGCAGGAGTGAACCTACTGTTACAAATGTTCAAGgtaagctgct ... gggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTC
acactgacacatacacaccaggtttcgtctattgactagtttggggggttgatagACTCTCCAGCCTCAACAGGGTTGTCCCTAGAAACCGCGAAGAAGGATGTTCTCGGCGCTTTGTCACAAATTATCGACCCCGATTTTGGGACGGACATTGT
tattgac putative branch site (score: 6)