1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gttggcaccgtgtctacattctctgcgagtctgtgacggtccgccaatttattgttgcaaatttaaattgaaatcgaaagagtactactggcttttaaattgacatatttcattactgttaccagGACTGTTTCAATCGACCAATTGCCAGTGCACCTACCAATTGGGTTGACGTTATCGAGCGTGTATCCTATGACAGCAACAAAACACTGCA
species | Physcomitrella patens |
transcript | PP1S377_35V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ACACGCGTAGGCTTTACAACCGCATTCAG GACTGTTTCAATCGACCAATTGCCAGTGCACCTACCAATTGGGTTGACGTT
genomic: ACACGCGTAGGCTTTACAACCGCATTCAGgttggcaccg ... ctgttaccagGACTGTTTCAATCGACCAATTGCCAGTGCACCTACCAATTGGGTTGACGTT
aaatcgaaagagtactactggcttttaaattgacatatttcattactgttaccagGACTGTTTCAATCGACCAATTGCCAGTGCACCTACCAATTGGGTTGACGTTATCGAGCGTGTATCCTATGACAGCAACAAAACACTGCA
aattgac putative branch site (score: 19)
ttttaaattgacatat TA-rich tract