1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...tgtgttcgaacctgcttaagttttgtaattgaaagctcttcattgctaggagtatatctgtagacatggtattgaataatgatactaatgtctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAGTGCTGTACAAATTCTGGCATTGTTTGACAGGCTTGATGCCGTGGATGC
species | Physcomitrella patens |
transcript | PP1S34_430V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|100429526|gb|BY959607.1|BY959607
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: AAGGTCGATGAGATCGTGCCTTGAGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|22492619|gb|BU052542.1|BU052542
genomic: AAGGTCGATGAGATCGTGCCTTG-GATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|100437122|gb|BY961362.1|BY961362
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|100418156|gb|BY993361.1|BY993361
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|100422700|gb|BY957957.1|BY957957
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|100440809|gb|BY980629.1|BY980629
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|208377833|gb|DC940945.1|DC940945
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|100424688|gb|BY976765.1|BY976765
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAEST: gi|100440735|gb|BY980555.1|BY980555
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
EST: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCG GAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
genomic: GAAGGTCGATGAGATCGTGCCTTGGATTCTCATGTGCCAGGATGAGTGCGgtagtcatcc ... tctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGA
ctaggagtatatctgtagacatggtattgaataatgatactaatgtctcttgcagGAGGTTTCGGAGGAAACCATCAGCACGATCCGCACATCCTGTACACGCTGAGTGCTGTACAAATTCTGGCATTGTTTGACAGGCTTGATGCCGTGGATGC
tactaat putative branch site (score: 10)
tgtctctt CT-rich tract
tattgaataatgata TA-rich tract