1 5' 3' | 2 5' 3' | 3 5' 3' |
...ttttatcctcaattcacttactacgcggtgacatttctttagaaattcgaggttccatgttcaattagaaaatggtttgctgagtatatttgacgcccagGACATGGCAGACAATCTTGAGGACGCCAGTAACGAGCTCATATTAGCAGATGAACCAGAACTGCGATACCTGATTGGCGAGGTGTTTACCCACCTGCCAG
species | Physcomitrella patens |
transcript | PP1S341_64V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GTCTCAATAACAAGTTTCATGAACTTGAGGACGAGATTAAGGCGAAGAAG GACATGGCAGACAATCTTGAGGACGCCAGTAACGAGCTCATATTAGCAGATEST: gi|37845138|gb|BJ603146.1|BJ603146
genomic: GTCTCAATAACAAGTTTCATGAACTTGAGGACGAGATTAAGGCGAAGAAGgtattgctta ... tgacgcccagGACATGGCAGACAATCTTGAGGACGCCAGTAACGAGCTCATATTAGCAGAT
EST: GTCTCAATAACAAGTTTCATGAACTTGAGGACGAGATTAAGGCGAAGAAG GACATGGCAGACAATCTTGAGGACGCCAGTAACGAGCTCATATTAGCAGAT
genomic: GTCTCAATAACAAGTTTCATGAACTTGAGGACGAGATTAAGGCGAAGAAGgtattgctta ... tgacgcccagGACATGGCAGACAATCTTGAGGACGCCAGTAACGAGCTCATATTAGCAGAT
ttcgaggttccatgttcaattagaaaatggtttgctgagtatatttgacgcccagGACATGGCAGACAATCTTGAGGACGCCAGTAACGAGCTCATATTAGCAGATGAACCAGAACTGCGATACCTGATTGGCGAGGTGTTTACCCACCTGCCAG
atttgac putative branch site (score: 15)
ttcaattagaaaat TA-rich tract