1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...ttaaatacgttgatcgagtcgcgctgaaaccaactgaactagttgaaagctgtgcatcttcatatacttggttttaatagctcattatcccccaacgcagGTTGGCGCAGAGATGCAGTACAACGAGGGCCACAGCGACTGAGTTCCCCACTAAGACTACGA
species | Physcomitrella patens |
transcript | PP1S309_73V6.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTCATGGGTTCATTGAAGGGCTTGAAGCTGTCAGCTGCCCCCGTTCGCCG GTTGGCGCAGAGATGCAGTACAACGAGGGCCACAGCGACTGAGTTCCCCACEST: gi|67507813|gb|BJ940690.1|BJ940690
genomic: TTCATGGGTTCATTGAAGGGCTTGAAGCTGTCAGCTGCCCCCGTTCGCCGgtaggatttc ... cccaacgcagGTTGGCGCAGAGATGCAGTACAACGAGGGCCACAGCGACTGAGTTCCCCAC
EST: TTCATGGGTTCATTGAAGGGCTTGAAGCTGTCAGCTGCCCCCGTTCGCCG GTTGGCGCAGAGATGCAGTACAACGAGGGCCACAGCGACTGAGTTCCC-AC
genomic: TTCATGGGTTCATTGAAGGGCTTGAAGCTGTCAGCTGCCCCCGTTCGCCGgtaggatttc ... cccaacgcagGTTGGCGCAGAGATGCAGTACAACGAGGGCCACAGCGACTGAGTTCCCCAC
aaagctgtgcatcttcatatacttggttttaatagctcattatcccccaacgcagGTTGGCGCAGAGATGCAGTACAACGAGGGCCACAGCGACTGAGTTCCCCACTAAGACTACGA
ttttaat putative branch site (score: 3)
ttatccccc putative PPT
ttttaata TA-rich tract