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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG

Basic information

species Physcomitrella patens
transcript PP1S28_196V6.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: LOC_Os03g01910.1 (Oryza sativa), 3'ss of exon 2
ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctg-----aacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
       | ||   ||  ||  | | |  || || |    |||    | | |  |||||  |      |  |  | | | |||     |||           |||||||||||| || ||||||||||| ||||||||||| ||||||||| | || |||||||||||  || | |||||||||| |||||| || || ||||||
-----aagatatactgggcttgtattttgggatccgatcttttaaacaatgtattgtgctgtggcctttggattcatattaatacttgttgtgcatttatggcagGAAGAAGAAGGCAGTTCACAAGACTACCACCACTGATGACAAGAGGCTTCAAAGCACCTTGAAAAGAGTAGGAGTGAACAACATTCCTGGTATCGAAGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: LOC_Os03g63400.1 (Oryza sativa), 3'ss of exon 2
-ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
 |  ||      | || |   ||    |||       |   | | | | |  ||  |     |         |  |   |    |||| || | |    ||||||||||| || || ||||||||    |||||||||||||||||| ||||||||||  | ||| || | || || |||||||| ||||  || || |||
gtgggtaaatcgcctt-tgtcgcgaaatgaaatgaatgtcttgttctttgcttctcgccgtgtcgcgaaatgaaacaaatgtgcttcattttgtttgttagGAAGAAGAAGGCCGTCCACAAGACGGGGACCACTGACGACAAGAGGCTGCAGAGCACGCTCAAGAGAGTAGGTGTCAACACCATCCCCGCGATCGAGGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: GRMZM2G110116_T01 (Zea mays), 3'ss of exon 2
ttcgtctgctactttgtactgctttgtgag--gctctgggagtt--tccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
   |      |   |||   | |||||||   | ||   ||||      || | | |||  | || |||    |||   || | |    |||   ||||  |||||||||||| || |||||||||||||| ||||| || |||||| || | ||||||||||||||  |  |||| | |||||||||||| || || || |||
caagcacctaagcctgt-tgggtttgtgatctgttcatagagtcaacttctggacccata-gtcccatgctaactaat-ttatgagggacaaaatgctgg-cagGAAGAAGAAGGCAGTTCACAAGACCACGACCACCGATGACAAGCGGCTTCAGAGCACCTTGAAAAGGATCGGGGGGAACACCATTCCTGGTATCGAGGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: GRMZM2G131577_T03 (Zea mays), 3'ss of exon 2
ttcgtctgctactttgtactgct-ttgtgaggctctgggagtttccctagtc--tcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
 |  | |  ||  | ||||   |  ||| |       ||       ||||    || ||    ||   |  |      |    |  ||   ||||  |  |||||||||||| || || |||||||| || ||||| || || || ||| | ||||||||| ||||  || | ||||||||||||||||| || |||||||||
gttatata-tatatggtaccattgctgtcatatgtacggtaccggtctaggaagtcctggattcttacttataagttataactagctttggttggtgg--cagGAAGAAGAAGGCAGTCCACAAGACTACGACCACAGATGATAAAAGGCTTCAGAGCACCCTGAAAAGAATAGGAGTGAACACCATTCCTGGTATTGAAGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: GRMZM2G041881_T01 (Zea mays), 3'ss of exon 2
----ttcgtctgctac-tttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
       | ||  | | |||||  |    | ||      || |  |    || | | |||  | || |||    | |    ||        |||  ||||| |||||||||||| || || ||||||||| | ||||| || |||||| || | |||||||| |||||  || | ||||||||||| ||||| || ||||| |||
caccgaagccttttgcgtttgtgatatgatatgttttattgagt-tgcttctggacccata-gtcccatgctaacaatttatgagggaaaaaat--gctga-cagGAAGAAGAAGGCAGTCCACAAGACCGCAACCACCGATGACAAGCGGCTTCAGAGCACGTTGAAAAGAATTGGAGTGAACACTATTCCTGGTATTGAGGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: GRMZM2G023242_T05 (Zea mays), 3'ss of exon 2
ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaa--------ttggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
         ||  |  | |||    |   |||||| | |  |    |  ||  |||||   |  |  | |     |||  ||||  ||        |||| |   |||||||||||| ||||| ||||||||   |||||| |||||||||||| ||||| ||||  | ||| || | || || |||||||| || | ||| || |||
--------gtaggtgttgctgaccagctcggctctcgcatgtcttgtgttcatatgtggt-tgcgaagccagtggttg--aattagaaaatgagctttgggttttcagGAAGAAGAAGGCTGTACACAAGACGGTCACCACGGACGACAAGAGGCTGCAGGGCACTCTCAAGAGAGTAGGGGTCAACACCATCCCTGCAATCGAGGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: GRMZM2G001887_T03 (Zea mays), 3'ss of exon 2
ttcgtctgctactttgtactgct-ttgtgaggc-tctggga--gtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
    | |  ||  | ||||   |  ||| |  | | ||  |  | | |   |   || ||    || |       |   |  | |  ||  |||||  |  |||||||||||| || || |||||||| || ||||| || |||||  || | || |||||||||||  || | |||||||||| |||||| || |||||||||
--gctgtcatatatggtaccaatgctgtcatacatatgataccggtccatgaaagtcctggattctgtacttataattataattatatttgattggtgg--cagGAAGAAGAAGGCAGTCCACAAGACTACAACCACAGATGACAAACGGCTTCAAAGCACCTTGAAAAGAATAGGAGTGAACAGCATTCCTGGTATTGAAGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: AT1G73230.1 (Arabidopsis thaliana), 3'ss of exon 2
ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
   || | ||  ||| |     ||| || |  | || |  ||| ||   | ||||||    ||| |  ||||  | | |  | |   |||       ||| |||||||| ||||||||||||||||| || || || ||||||||| | ||||||||  | ||| || | ||||| ||  |||||||||  |||||||| 
---gtatactcatttatgtc-ttttctgtgaatttgtgtttttgccatttttcatgt----tatattctctaaacattttgactctcattt------cagAAAGAAGAAGGCTGTTCACAAGACCACTACAACCGATGACAAGAGGCTCCAGAGCACTCTTAAGAGAGTTGGAGTCAATTCCATTCCCGCCATTGAAGAA

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EDO98665 (Chlamydomonas reinhardtii), 3'ss of exon 1
ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtca-atttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
               || | ||     ||||| | |   | | | ||  | |   | | |     || |   | |  | || ||| ||||     |  |||||||||||| || || |||||||||||| |||||||||||||| ||||||| | |||| | ||||| || || ||||||||||| ||||| || || |||
---------------gtgcggcggctggaggcgc-gctcggtgcactgctttttggggtcaccgctgatgcgcgcggggcatattgcaat-----gtgcagGAAGAAGAAGGCCGTGCACAAGACCACCTCCACTGACGACAAGCGGTTGCAAAACACCCTCAAGCGCCTGGGCGTGAACACCATCCCCGGCATCGAGGAG

upper sequence: PP1S28_196V6.1 (Physcomitrella patens), 3'ss of exon 2
lower sequence: EFJ21066 (Selaginella moellendorffii), 3'ss of exon 1
ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtca-atttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
                                              ||      || |       |||   |   | || | | |||        |  |||||||||||| || || ||||||||| | ||||| ||||||||||||||||| | |||  | ||| || | || || |||||||| ||||| ||||| |||
---------------------------------------------gtaaagatttgggattagattggaagattttggtgagaattctggcaatcg--cagGAAGAAGAAGGCAGTGCACAAGACCGCGACCACCGACGACAAGAGGTTGCAAAACACGCTCAAGAGATTGGGCGTCAACACCATCCCCGGCATTGAGGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67568857|gb|BJ941681.1|BJ941681
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|7583801|gb|AW699705.1|AW699705
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|67508609|gb|BJ941471.1|BJ941471
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|67575201|gb|BJ948025.1|BJ948025
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|37824378|gb|BJ582444.1|BJ582444
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|67698660|gb|BJ958893.1|BJ958893
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|162244341|gb|FC423814.1|FC423814
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|67576050|gb|BJ948874.1|BJ948874
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|162244340|gb|FC423813.1|FC423813
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|162201321|gb|FC376839.1|FC376839
EST:     ACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|18361165|gb|BJ193230.1|BJ193230
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|18345206|gb|BJ177247.1|BJ177247
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|67696648|gb|BJ956881.1|BJ956881
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|162201322|gb|FC376840.1|FC376840
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|67573263|gb|BJ946087.1|BJ946087
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|67692062|gb|BJ952295.1|BJ952295
EST:     ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: ATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
EST: gi|37839056|gb|BJ597064.1|BJ597064
EST:     CAGTGTCAGGAG                         GAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA
genomic: CAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 72

ATGAACAGGGAGAAGCTGATGAAGATGGCTAGTGCAGTTCGCACTGGTGGAAAGGGCAGTGTCAGGAGgtgagtgatg ... ggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG
                                   aatttcaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ttcgtctgctactttgtactgctttgtgaggctctgggagtttccctagtctcatgtgccctatgtggtctacccttgtcaatttcaattggctgaacagGAAGAAGAAAGCTGTTCACAAGACCACCACCACTGACGACAAGAGGTTGCAGAGCACCTTGAAGCGACTCGGAGTGAACACCATTCCCGGAATTGAAGAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGA