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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtggtaagatgctgaatatcactaccatgaactgtttaaagtaatacgtttatttatttcaacccatcagagctatactcttaagtgcctcaattagactcgcgaaagaatccacccccaggccgcttgccgacttttcgtgcccatagtcgtgcaactcactccgaattcatggcttttgtagGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTGCAGAGGCTGCCCCCAAGGAGGAGGAGAAGAAG

Basic information

species Physcomitrella patens
transcript PP1S28_131V6.1
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162212130|gb|FC388240.1|FC388240
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|18336644|gb|BJ168667.1|BJ168667
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|18328416|gb|BJ160421.1|BJ160421
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCT
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGG-TGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCT
EST: gi|162204940|gb|FC380622.1|FC380622
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|208380663|gb|DC919407.1|DC919407
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67721293|gb|BJ971552.1|BJ971552
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|19784620|gb|BQ040215.1|BQ040215
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162272286|gb|FC448990.1|FC448990
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTG
EST: gi|67721505|gb|BJ971764.1|BJ971764
EST:     GCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: GCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162211909|gb|FC387781.1|FC387781
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162247100|gb|FC422274.1|FC422274
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162223265|gb|FC400234.1|FC400234
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67728255|gb|BJ978514.1|BJ978514
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67724164|gb|BJ974423.1|BJ974423
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|162249364|gb|FC424008.1|FC424008
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|162276648|gb|FC452226.1|FC452226
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|67726840|gb|BJ977099.1|BJ977099
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67719997|gb|BJ970256.1|BJ970256
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67702786|gb|BJ963019.1|BJ963019
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|162249365|gb|FC424009.1|FC424009
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162229605|gb|FC404873.1|FC404873
EST:     CAAGTTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162212129|gb|FC388239.1|FC388239
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162237581|gb|FC413651.1|FC413651
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|162275685|gb|FC451362.1|FC451362
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162223266|gb|FC400235.1|FC400235
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162241567|gb|FC414689.1|FC414689
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|208393919|gb|DC946129.1|DC946129
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67718352|gb|BJ968611.1|BJ968611
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagGAGGTGGTGGTG
EST: gi|67709652|gb|BJ965468.1|BJ965468
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGAAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|162272285|gb|FC448989.1|FC448989
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTG
EST: gi|162205764|gb|FC381002.1|FC381002
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|67727946|gb|BJ978205.1|BJ978205
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67727415|gb|BJ977674.1|BJ977674
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|162211908|gb|FC387780.1|FC387780
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162204941|gb|FC380623.1|FC380623
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|208348311|gb|DC905525.1|DC905525
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|162205765|gb|FC381003.1|FC381003
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|18325231|gb|BJ157227.1|BJ157227
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGC
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGC
EST: gi|162247099|gb|FC422273.1|FC422273
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162237582|gb|FC413652.1|FC413652
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|162229606|gb|FC404874.1|FC404874
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGGTG                       
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGA---Ggtggtaagat ... gcttttgt
EST: gi|67723728|gb|BJ973987.1|BJ973987
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGAAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67710237|gb|BJ965900.1|BJ965900
EST:     CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAG                         GTGGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
genomic: CAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagG---AGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTG
EST: gi|67702998|gb|BJ963231.1|BJ963231
EST:     GACCTCATCACCAATGTTGGANGT
genomic: GACCTCATCACCAATGTTGGA-G-
EST: gi|67702998|gb|BJ963231.1|BJ963231
EST:     GACCTCATCACCAATGTTGGANGT
genomic: GACCTCATCACCAATGTTGGA-G-

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 7

GTCAAGGCTGCCAATGTGCAAGTAGAGGGCTACTGGCCCGGGCTTTTTGCCAAGCTATGCGAAAAGAGAAGCGTTGACGACCTCATCACCAATGTTGGAGgtggtaagat ... gcttttgtagGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTGCAGAGGCTGCCCCCAAGGAGGAGGAGAAGAAG




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 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ccgacttttcgtgcccatagtcgtgcaactcactccgaattcatggcttttgtagGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTGCAGAGGCTGCCCCCAAGGAGGAGGAGAAGAAG
                          aactcac  putative branch site (score: 7)
                                              cttttgt  putative PPT
                                     aattcat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtggtaagatgctgaatatcactaccatgaactgtttaaagtaatacgtttatttatttcaacccatcagagctatactcttaagtgcctcaattagactcgcgaaagaatccacccccaggccgcttgccgacttttcgtgcccatagtcgtgcaactcactccgaattcatggcttttgtagGAGGTGGTGGTGCTGTTGCTGTGAGCGCCGCACCTGCTGCTTCCGCTGCTGCAGAGGCTGCCCCCAAGGAGGAGGAGAAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG