1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
...aatgtgaattctcagagaagaagattgttgcgaataagctggtgttcagttcgggtgtgtgtctaatgcgttttccacaacctgttatcgtgctgagcagTTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTGGCCCGTCATCCTAACCGACCAACTGTCCTAGACCACGTCATGAATATCA
species | Physcomitrella patens |
transcript | PP1S275_19V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCATGGATTTTACTGATCAAATTGCTGAGCTCGAAGAGAGATATAACCAG TTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTGEST: gi|162188653|gb|FC364563.1|FC364563
genomic: GCATGGATTTTACTGATCAAATTGCTGAGCTCGAAGAGAGATATAACCAGgttagtcatt ... tgctgagcagTTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTG
EST: GCATGGATTTTACTGATCAAATTGCTGAGCTCGAAGAGAGATATAACCAG TTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTGEST: gi|162191351|gb|FC368147.1|FC368147
genomic: GCATGGATTTTACTGATCAAATTGCTGAGCTCGAAGAGAGATATAACCAGgttagtcatt ... tgctgagcagTTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTG
EST: GCATGGATTTTACTGATCAAATTGCTGAGCTTGAAGAGAGATATAACCAG TTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTG
genomic: GCATGGATTTTACTGATCAAATTGCTGAGCTCGAAGAGAGATATAACCAGgttagtcatt ... tgctgagcagTTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTG
tcagttcgggtgtgtgtctaatgcgttttccacaacctgttatcgtgctgagcagTTGCGTAGGGAGCTCTATGGACAACTTACACCAATGCAGCGCCTTAGTGTGGCCCGTCATCCTAACCGACCAACTGTCCTAGACCACGTCATGAATATCA
gtctaat putative branch site (score: 2)