1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...tgaagaattttccctgtgtcaaacaccattgcttgaccttggtgactgttgggttctttttgagctgcttattcaagaaatggataatgcattaatgcagGGGAAGTCAAGAGCGGTAATGTCCGTTGCTACCGATGTGTCTCGATTTGAGTCAGTTTCTATGGCTCCTGCGGATCCCATTTTGGGTGTCTCTGAGGCAT
species | Physcomitrella patens |
transcript | PP1S245_98V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GGATTGCCGCTTTTCCTCAGAAGAATGGAAACATTACATTGTGTTCCCAG GGGAAGTCAAGAGCGGTAATGTCCGTTGCTACCGATGTGTCTCGATTTGAGEST: gi|100360663|gb|BY965570.1|BY965570
genomic: GGATTGCCGCTTTTCCTCAGAAGAATGGAAACATTACATTGTGTTCCCAGgtgagtggag ... attaatgcagGGGAAGTCAAGAGCGGTAATGTCCGTTGCTACCGATGTGTCTCGATTTGAG
EST: GGATTGCCGCTTTTCCTCAGAAGAATGGAAACATTACATTGTGTTCCCAG GGGAAGTCAAGAGCGGTAATGTCCGTTGCTACCGATGTGTCTCGATTTGAG
genomic: GGATTGCCGCTTTTCCTCAGAAGAATGGAAACATTACATTGTGTTCCCAGgtgagtggag ... attaatgcagGGGAAGTCAAGAGCGGTAATGTCCGTTGCTACCGATGTGTCTCGATTTGAG
ctgttgggttctttttgagctgcttattcaagaaatggataatgcattaatgcagGGGAAGTCAAGAGCGGTAATGTCCGTTGCTACCGATGTGTCTCGATTTGAGTCAGTTTCTATGGCTCCTGCGGATCCCATTTTGGGTGTCTCTGAGGCAT
cattaat putative branch site (score: 46)
ttcttttt TA-rich tract