1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...cgatagcctatgttctatagtttgaacttcgattgtcctgctattctatttacatgatgtccctgatgtttatagctattcctttaatgtattttggtagGACATGGTGGCTCCCGAGCAGCAGTATACGTGAAGCAAAACCTCTTCAAGAATTTGCTAGGGCATCCTCAATTTGTAACTGACACCAACCTCGCAATTG
species | Physcomitrella patens |
transcript | PP1S225_37V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCGTTTTTGATN GACATGGTGGCTCCCGAGCAGCAGTATACGTGAAGC-AAANCTTTTCAAGA
genomic: GCGTTTTTGATGgtaagttgcc ... attttggtagGACATGGTGGCTCCCGAGCAGCAGTATACGTGAAGCAAAACCTCTTCAAGA
ctatttacatgatgtccctgatgtttatagctattcctttaatgtattttggtagGACATGGTGGCTCCCGAGCAGCAGTATACGTGAAGCAAAACCTCTTCAAGAATTTGCTAGGGCATCCTCAATTTGTAACTGACACCAACCTCGCAATTG
ctttaat putative branch site (score: 10)
tttaatgtatttt TA-rich tract