Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttcagctcagtcaattgttcggaacatcgcagtcgatgtagggagcttgacgttgttagctgagtatgtgattgtctgactcgctacgtccttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGGCTACTTTTCCCCGCCGACGCGATTGCCAAAGCCAAGCACTATTTGGCTA

Basic information

species Physcomitrella patens
transcript PP1S215_28V6.1
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|162184664|gb|FC361902.1|FC361902
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162207832|gb|FC384125.1|FC384125
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100388003|gb|BY988476.1|BY988476
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCCTTCTTGATGGATGACCCCCATGTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCC-TTCTTGATGGATGACCCCCATGTTGG
EST: gi|208400418|gb|DC908645.1|DC908645
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100371525|gb|BY968022.1|BY968022
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100395972|gb|BY972219.1|BY972219
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162166511|gb|FC343208.1|FC343208
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100448661|gb|CJ972960.1|CJ972960
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100393479|gb|BY953418.1|BY953418
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162214587|gb|FC390618.1|FC390618
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100417952|gb|BY993265.1|BY993265
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162155910|gb|FC332459.1|FC332459
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162151638|gb|FC327767.1|FC327767
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162153918|gb|FC329425.1|FC329425
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|18346385|gb|BJ178428.1|BJ178428
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100392222|gb|BY953255.1|BY953255
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100384799|gb|BY969534.1|BY969534
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162186627|gb|FC363599.1|FC363599
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162152068|gb|FC328463.1|FC328463
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100437194|gb|BY961398.1|BY961398
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162155922|gb|FC332471.1|FC332471
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100360719|gb|BY965863.1|BY965863
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100441845|gb|BY981068.1|BY981068
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100448584|gb|CJ972883.1|CJ972883
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100448006|gb|CJ972305.1|CJ972305
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100402755|gb|BY973340.1|BY973340
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|18345854|gb|BJ177897.1|BJ177897
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162177756|gb|FC354590.1|FC354590
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162178101|gb|FC354403.1|FC354403
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162186048|gb|FC361876.1|FC361876
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162161643|gb|FC339058.1|FC339058
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100390035|gb|BY989115.1|BY989115
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100441603|gb|BY981025.1|BY981025
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|18374736|gb|BJ206314.1|BJ206314
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100425083|gb|BY976964.1|BY976964
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100360291|gb|BY966102.1|BY966102
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|162181637|gb|FC357939.1|FC357939
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100418930|gb|BY975809.1|BY975809
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100398360|gb|BY972565.1|BY972565
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
EST: gi|100437396|gb|BY961497.1|BY961497
EST:     TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAG                         GTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG
genomic: TCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 35 (upstream exon), 35 (downstream exon)
Score: 32

ATCATTTTCACCAATGTCGGCAACCCGCATGCTCTTGGTCAGAAGCCTCTTACATTCCCTCGCCAGgtgactcccc ... cttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGGCTACTTTTCCCCGCCGACGCGATTGCCAAAGCCAAGCACTATTTGGCTA




<











<


<











 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

cttgacgttgttagctgagtatgtgattgtctgactcgctacgtccttgccacagGTCATGGCTCTGTGTCAGGCCCCCTTCTTGATGGATGACCCCCATGTTGGGCTACTTTTCCCCGCCGACGCGATTGCCAAAGCCAAGCACTATTTGGCTA
                            gtctgac  putative branch site (score: 32)
                                           tccttgcc  putative PPT