1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tgttaattgctaacatatctgcatgcctgactaataatcacgaaacggcgttgatattttcatcatcgtgaaacggaaatgtgtgttggatgaattgtagGTGTCTGCGCTGGGGCTCGGATGCAGGAGCTTGTCATCATCACACGAGAGACCTGTTGAGCTAAATGATGCTCTGGATGTTTTAAACCTTGCCGTCGACA
species | Physcomitrella patens |
transcript | PP1S158_112V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAGGCCCCTATCTCGTGCCACGACGCAAGCTTGGCTCCCAGGGTTTGGAG GTGTCTGCGCTGGGGCTCGGATGCAGGAGCTTGTCATCATCACACGAGAGA
genomic: CAGGCCCCTATCTCGTGCCACGACGCAAGCTTGGCTCCCAGGGTTTGGAGgtaagtactg ... tgaattgtagGTGTCTGCGCTGGGGCTCGGATGCAGGAGCTTGTCATCATCACACGAGAGA
cggcgttgatattttcatcatcgtgaaacggaaatgtgtgttggatgaattgtagGTGTCTGCGCTGGGGCTCGGATGCAGGAGCTTGTCATCATCACACGAGAGACCTGTTGAGCTAAATGATGCTCTGGATGTTTTAAACCTTGCCGTCGACA
cgttgat putative branch site (score: 5)
ttgatatttt TA-rich tract