1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtacagtttcaagtttttcatgttctcaatcctctcactgatctctctttttttttttttgacatcttcgtaccctgcttgacgctgttttttctaaccacccctcttctttattgtgcagcttgtgattcttttcatgaagtggtaatgtttcatgtacactgacgaagaaacagccataatggaaggattgtgcagGATGTGCGACAGGCCACATTGGTTCTCAACCAGAGCAAGGAGGAAATCCTTTCTTACATAGCCGAGTCAAAAAGACAGGAGGGTGATCACATTCTCACTA
species | Physcomitrella patens |
transcript | PP1S149_77V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCGAGGAGATGAAGGTACCCGATGAGAAGGTGCTTGAACCAGTTGAACGG GATGTGCGACAGGCCACATTGGTTCTCAACCAGAGCAAGGAGGAAATCCTT
genomic: CCGAGGAGATGAAGGTACCCGATGAGAAGGTGCTTGAACCAGTTGAACGGgtacagtttc ... gattgtgcagGATGTGCGACAGGCCACATTGGTTCTCAACCAGAGCAAGGAGGAAATCCTT
ggtaatgtttcatgtacactgacgaagaaacagccataatggaaggattgtgcagGATGTGCGACAGGCCACATTGGTTCTCAACCAGAGCAAGGAGGAAATCCTTTCTTACATAGCCGAGTCAAAAAGACAGGAGGGTGATCACATTCTCACTA
cactgac putative branch site (score: 14)
ataat TA-rich tract