1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...gagttattattctaaaccaactttgcggcttagctttttatattcttttcccttgcaatatcttcatggcactgaacagaatggatccttgcctatgcagTTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGGAAACGCCTTCGACAACAGGATCGATGCGAAGCGAACACTGCGTGAAATA
species | Physcomitrella patens |
transcript | PP1S149_39V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTG TTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGGEST: gi|162154102|gb|FC330545.1|FC330545
genomic: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTGgttagaatcc ... gcctatgcagTTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGG
EST: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTG TTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGGEST: gi|100357153|gb|BY983720.1|BY983720
genomic: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTGgttagaatcc ... gcctatgcagTTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGG
EST: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTG TTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGGEST: gi|18347968|gb|BJ180015.1|BJ180015
genomic: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTGgttagaatcc ... gcctatgcagTTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGG
EST: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTG TTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGG
genomic: TACAAGCCACCACTTCGTCCGATTGGGCGCGGAGCTTATGGAATCGTCTGgttagaatcc ... gcctatgcagTTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGG
ttttcccttgcaatatcttcatggcactgaacagaatggatccttgcctatgcagTTCACTCTTTGATACCGTTACGGGTGAGGAGGTGGCGGTCAAAAAGATTGGAAACGCCTTCGACAACAGGATCGATGCGAAGCGAACACTGCGTGAAATA
tccttgcct CT-rich tract
aatatctt TA-rich tract