1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gttcgccctctttgctcactataattgaagtggtttttagacatcgtagctgtttatgaaatcaaatgctatacaggaatgattaatggagatcgaactcgcggaattgcgtgatgcttgctatacagTGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAAGTCAGCCACGCCTGATGTGTCGCGCATTCGAGCTCCACGAAAAGGTGGG
species | Physcomitrella patens |
transcript | PP1S130_226V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GACAGGGAACCTGAAGGAGGATGCAAGTCGCGGGCATTTGACAATCACAG TGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAAEST: gi|162159319|gb|FC334626.1|FC334626
genomic: GACAGGGAACCTGAAGGAGGATGCAAGTCGCGGGCATTTGACAATCACAGgttcgccctc ... tgctatacagTGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAA
EST: GACAGGGAACCTGAAGGAGGATGCAAGTCGCGGGCATTTGACAATCACAG TGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAAEST: gi|100390071|gb|BY989151.1|BY989151
genomic: GACAGGGAACCTGAAGGAGGATGCAAGTCGCGGGCATTTGACAATCACAGgttcgccctc ... tgctatacagTGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAA
EST: GACAGGGAACCTGAAGGAGGATGCAAGTCGCGGGCATTTGACAATCACAG TGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAA
genomic: GACAGGGAACCTGAAGGAGGATGCAAGTCGCGGGCATTTGACAATCACAGgttcgccctc ... tgctatacagTGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAA
caggaatgattaatggagatcgaactcgcggaattgcgtgatgcttgctatacagTGACGGGAGGGCGGAAAGATTGGCGATTCTACGCAATTACGTCGGCGGCAAGTCAGCCACGCCTGATGTGTCGCGCATTCGAGCTCCACGAAAAGGTGGG
gattaat putative branch site (score: 2)
atgattaat TA-rich tract