1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...gtaatcccatttgataaattggccgccagataaattgaaggaataggttgcgaactctcgttgtctcctcttctcaatcatttataacattttcttgtagAAACTCGCTAAGGCTTCCGACGTCGGTACAAATACTGACAGTCATGGGACAGATGTGGCGCCGCTGACTGTTCCAGAGTTGCTCGAATCTTTGATGCGGC
species | Physcomitrella patens |
transcript | PP1S123_79V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCGAGAATGTCCAAAAGACGGAGTTCTTTGAAAATGTTAAGAAGAATCTC AAACTCGCTAAGGCTTCCGACGTCGGTACAAATACTGACAGTCATGGGACA
genomic: TCGAGAATGTCCAAAAGACGGAGTTCTTTGAAAATGTTAAGAAGAATCTCgtgagtttac ... tttcttgtagAAACTCGCTAAGGCTTCCGACGTCGGTACAAATACTGACAGTCATGGGACA
ggttgcgaactctcgttgtctcctcttctcaatcatttataacattttcttgtagAAACTCGCTAAGGCTTCCGACGTCGGTACAAATACTGACAGTCATGGGACAGATGTGGCGCCGCTGACTGTTCCAGAGTTGCTCGAATCTTTGATGCGGC
ttataac putative branch site (score: 3)
cattttctt CT-rich tract
aatcatttataacatt TA-rich tract