1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
...tttgacccggaaatcaaagaactgcgtagctagtatttctattgtttcgtttcgcgtgaaaggttatttacataacatgatcacgctttttctgttgcagGGACGCCATCATACAACATGTGAATAAGAAGATGAATGTAACTGTTATACCACTAACGTCAAAATCTGATGTTGAGGCTTTGTTGGAACCTAAGTCGCCA
species | Physcomitrella patens |
transcript | PP1S122_5V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
ttcgtttcgcgtgaaaggttatttacataacatgatcacgctttttctgttgcagGGACGCCATCATACAACATGTGAATAAGAAGATGAATGTAACTGTTATACCACTAACGTCAAAATCTGATGTTGAGGCTTTGTTGGAACCTAAGTCGCCA
acataac putative branch site (score: 2)
ctttttctgtt putative PPT
ttatttacataacat TA-rich tract