1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaagatcctttccttaccttctgccatttttcgttttcttcttctgcacattaatttgagaacccggatttcgaacgccaatttcaaccttggatgcaattttgaagtggaatggctttgaaaagcttcggctagcggccagaggaacgctaatagttttattcttttctatttttatcgaacatggcagGAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAAGCTATGGAAAGGTGGCAAGCACCGCCTTGGCATATGCAATGAATGACGA
species | Physcomitrella patens |
transcript | PP1S115_125V6.4 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GAAAGCTGATGGCTTGACTTTTCTTTGTATGGCTAGTGATACATTTGGAA GAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAAEST: gi|100393349|gb|BY989833.1|BY989833
genomic: GAAAGCTGATGGCTTGACTTTTCTTTGTATGGCTAGTGATACATTTGGAAgtaagatcct ... aacatggcagGAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAA
EST: GAAAGCTGATGGCTTGACTTTTCTTTGTATGGCTAGTGATACATTTGGAA GAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAAEST: gi|100423894|gb|BY976578.1|BY976578
genomic: GAAAGCTGATGGCTTGACTTTTCTTTGTATGGCTAGTGATACATTTGGAAgtaagatcct ... aacatggcagGAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAA
EST: GAAAGCTGATGGCTTGACTTTTCTTTGTATGGCTAGTGATACATTTGGAA GAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAA
genomic: GAAAGCTGATGGCTTGACTTTTCTTTGTATGGCTAGTGATACATTTGGAAgtaagatcct ... aacatggcagGAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAA
cggccagaggaacgctaatagttttattcttttctatttttatcgaacatggcagGAAGAATTCCTTTTTCATATCTGGAGGATATCCACATGAGGTTCATGAAAAGCTATGGAAAGGTGGCAAGCACCGCCTTGGCATATGCAATGAATGACGA
cgctaat putative branch site (score: 3)
taatagttttattctt TA-rich tract