1 5' 3' | 2 5' 3' | 3 5' 3' |
gtacgtggtaatccctcgggcgatgtccctggtatcgcgtttctaatggttcttcccgcaaccatctcgtgcagtgatccttgaactaggtcacgagtaccttaatgtctcaatggagtgtgggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGACACTTTCAGTGCCGAGCACAGTTTCACGACACTTCCGCTACCAAGCCC
species | Physcomitrella patens |
transcript | PP1S101_103V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGEST: gi|18350104|gb|BJ182155.1|BJ182155
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
EST: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGEST: gi|18328917|gb|BJ160923.1|BJ160923
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
EST: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGEST: gi|67718139|gb|BJ968398.1|BJ968398
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAG
EST: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGEST: gi|100403621|gb|BY955018.1|BY955018
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
EST: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGEST: gi|100387294|gb|BY970438.1|BY970438
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
EST: TGGGCTTCGCAACTACACCTCNGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGEST: gi|100358921|gb|BY946755.1|BY946755
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
EST: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGEST: gi|208348351|gb|DC905551.1|DC905551
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
EST: TGGNCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGEST: gi|100404807|gb|BY991293.1|BY991293
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
EST: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTG GTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
genomic: TGGGCTTCGCAACTACACCTCGGGAATCATCCACCACGTCAGGCTTACTGgtacgtggta ... ggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAG
tccttgaactaggtcacgagtaccttaatgtctcaatggagtgtgggtggttcagGTCTGCAACCCAACACGCGTTATTACTTCCAGTGCGGGGATGCTGCCACAGACACTTTCAGTGCCGAGCACAGTTTCACGACACTTCCGCTACCAAGCCC
ccttaat putative branch site (score: 1)
ttaatgt TA-rich tract