1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' |
gtaagtatcattttttggacaattgtacagttgctgaacactacaatgatctgagttgtggatctagcagcacctaaacagtacccattcgctacttcttcaagaagtggagaatgtatttttgtgtttggcgataggttgatgtttttgaaattatctttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTACTTGGACGTCATCCAAAG
species | Physcomitrella patens |
transcript | PP1S414_24V6.1 |
intron # | 19 |
splice site | 3' |
intron type | U2 |
EST: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGC AGCACGTAAGGCAGATAAACTCCGTTATCGCTATCCTCGTGGTGAATCTTAEST: gi|162258015|gb|FC434109.1|FC434109
genomic: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGCgtaagtatca ... tttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTA
EST: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGC AGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTAEST: gi|37843086|gb|BJ601094.1|BJ601094
genomic: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGCgtaagtatca ... tttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTA
EST: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGC AGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTAEST: gi|37840559|gb|BJ598567.1|BJ598567
genomic: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGCgtaagtatca ... tttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTA
EST: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGC AGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTAEST: gi|67698398|gb|BJ958631.1|BJ958631
genomic: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGCgtaagtatca ... tttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTA
EST: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGC AGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTAEST: gi|208397007|gb|DC924685.1|DC924685
genomic: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGCgtaagtatca ... tttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTA
EST: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGC AGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTA
genomic: GATGGAATGACGTACGAAGAGATCAAAGAATCTATGCCTGAAGAATATGCgtaagtatca ... tttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTA
atgtatttttgtgtttggcgataggttgatgtttttgaaattatctttgtttcagAGCACGTAAGGCAGATAAACTCCGCTATCGCTATCCTCGTGGTGAATCTTACTTGGACGTCATCCAAAG
ggttgat putative branch site (score: 1)
tctttgtttc putative PPT
tttttgaaattatctt TA-rich tract