1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' |
gtactcctcttgctctttttcttcctgccttgctcttgcttacttgctacccatgacattttgaaaggaagttggcgttcacagttgacttttattgcagACGGGAGATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTGTTGGTTGCCAGGTGGTCGGCTCAAAATCATCGACAG
species | Physcomitrella patens |
transcript | PP1S408_23V6.1 |
intron # | 19 |
splice site | 3' |
intron type | U2 |
EST: GTTCGAGGCCCCACATTGTTCAAAGGCTACTACAAAGATGAAGTTCAAAC ACGGGAGATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTGEST: gi|162205653|gb|FC381881.1|FC381881
genomic: GTTCGAGGCCCCACATTGTTCAAAGGCTACTACAAAGATGAAGTTCAAACgtactcctct ... tttattgcagACGGGAGATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTG
EST: GTTCGAGGCCCCACATTGTTCAAAGGCTACTACAAAGATGAAGTTCAAAC ACGGGAGATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTGEST: gi|162163688|gb|FC340287.1|FC340287
genomic: GTTCGAGGCCCCACATTGTTCAAAGGCTACTACAAAGATGAAGTTCAAACgtactcctct ... tttattgcagACGGGAGATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTG
EST: GTTCGAGGCCCCACATTGTTCAAAGGCTACTACAAAGATGAAGTTCAAAC ACGGGAAATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTG
genomic: GTTCGAGGCCCCACATTGTTCAAAGGCTACTACAAAGATGAAGTTCAAACgtactcctct ... tttattgcagACGGGAGATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTG
gctacccatgacattttgaaaggaagttggcgttcacagttgacttttattgcagACGGGAGATTTTTGATGAAGAGGGCTGGTTACATACTGGTGATATTGGGTGTTGGTTGCCAGGTGGTCGGCTCAAAATCATCGACAG
agttgac putative branch site (score: 22)
cttttatt CT-rich tract
attttgaaa TA-rich tract