1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
gtagggtcttgtgtggcatcttggattggcatgtttttgacaatctactgtctgcagttgagattcatcgaaacccgtcatcgtactattaaaagccctgacacgttgcgagatgttgggtgcagGGATCATCAACCTGGTGGCGGGCATCGGAAGCGAGATTTGGCAAAATCATTTCGTCACACATTATCATGCAAGTGCGACCCACCTATGGGTATTTGCCAG
species | Physcomitrella patens |
transcript | PP1S174_62V6.2 |
intron # | 19 |
splice site | 3' |
intron type | U2 |
EST: TTGTCTGCTGATGTGGCTCTGCGGCGACAACCACATACCATATTAGCAAG GGATCATCAACCTGGTGGCGGGCATCGGAAGCGAGATTTGGCAAAATCATTEST: gi|162275997|gb|FC452065.1|FC452065
genomic: TTGTCTGCTGATGTGGCTCTGCGGCGACAACCACATACCATATTAGCAAGgtagggtctt ... ttgggtgcagGGATCATCAACCTGGTGGCGGGCATCGGAAGCGAGATTTGGCAAAATCATT
EST: GGCGACAACCACATACCATATTAGCAAG GGATCATCAACCTGGTGGCGGGCATCGGAAGCGAGATTTGGCAAAATCATT
genomic: GGCGACAACCACATACCATATTAGCAAGgtagggtctt ... ttgggtgcagGGATCATCAACCTGGTGGCGGGCATCGGAAGCGAGATTTGGCAAAATCATT
aaacccgtcatcgtactattaaaagccctgacacgttgcgagatgttgggtgcagGGATCATCAACCTGGTGGCGGGCATCGGAAGCGAGATTTGGCAAAATCATTTCGTCACACATTATCATGCAAGTGCGACCCACCTATGGGTATTTGCCAG
ccctgac putative branch site (score: 3)
tactattaaaa TA-rich tract