1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
...gcgtgtacctgattgactcaacagttaatgcttgacgttgttatgcattattgaggaattggatgccaacgaaatagcctaattcggctctgtaatgcagGTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGACGCCGACGATGACGATGATTAGCATTCTTCAGTTAAACTCATCGCTAACG
species | Physcomitrella patens |
transcript | PP1S223_54V6.2 |
intron # | 18 |
splice site | 3' |
intron type | U2 |
EST: TGAGATTACGGGAAGATAAAACGCCTGTTGAAGCGACTTCAGCACAGCAG GTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGACEST: gi|37844774|gb|BJ602782.1|BJ602782
genomic: TGAGATTACGGGAAGATAAAACGCCTGTTGAAGCGACTTCAGCACAGCAGgtgtggacac ... tgtaatgcagGTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGAC
EST: GAAGCGACTTCAGCACAGCAG GTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGACEST: gi|37852476|gb|BJ610484.1|BJ610484
genomic: GAAGCGACTTCAGCACAGCAGgtgtggacac ... tgtaatgcagGTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGAC
EST: TGAGATTACGGGAAGATAAAACGCCTGTTGAAGCGACTTCAGCACAGCAG GTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGACEST: gi|162247433|gb|FC424999.1|FC424999
genomic: TGAGATTACGGGAAGATAAAACGCCTGTTGAAGCGACTTCAGCACAGCAGgtgtggacac ... tgtaatgcagGTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGAC
EST: TGAGATTACGGGAAGATAAAACGCCTGTTGAAGCGACTTCAGCACAGCAG GTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGACEST: gi|37838903|gb|BJ596911.1|BJ596911
genomic: TGAGATTACGGGAAGATAAAACGCCTGTTGAAGCGACTTCAGCACAGCAGgtgtggacac ... tgtaatgcagGTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGAC
EST: TGAGATTACGGGAAGATAAAACGCCTGTNGAAGCGACTTCAGCACAGCAG GTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGAC
genomic: TGAGATTACGGGAAGATAAAACGCCTGTTGAAGCGACTTCAGCACAGCAGgtgtggacac ... tgtaatgcagGTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGAC
cattattgaggaattggatgccaacgaaatagcctaattcggctctgtaatgcagGTCGCAGAAATGTATCGAGCTCAGAAGATCAACCATGGCCATGGTGGAGACGCCGACGATGACGATGATTAGCATTCTTCAGTTAAACTCATCGCTAACG
gcctaat putative branch site (score: 1)
aaata TA-rich tract