1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
...gttggattgccttggtcctattgctcttacattcgccgagtcttggtatgcagaatcttgctgtgtggtcgttactttttaacagagttttgttggacagGCCTGCTGTTGAAGACGTTCGCTGGCAAGATCCTGAGGAAAACATTTCAGACGACGACGAGGGATGTATACCTGATGAGGACAATACAGACGGACCTAAA
species | Physcomitrella patens |
transcript | PP1S58_81V6.2 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: AGTCGGGAGGAGTCCGAGAGGAGCTTCCCTCGTACTTTACATGCGGATAG GCCTGCTGTTGAAGACGTTCGCTGGCAAGATCCTGAGGAAAACATTTCAGAEST: gi|162197605|gb|FC374439.1|FC374439
genomic: AGTCGGGAGGAGTCCGAGAGGAGCTTCCCTCGTACTTTACATGCGGATAGgtatgtgaat ... tgttggacagGCCTGCTGTTGAAGACGTTCGCTGGCAAGATCCTGAGGAAAACATTTCAGA
EST: AGTCGGGAGGAGTCCGAGAGGAGCTTCCCTCGTACTTTACATGCGGATAG GCCTGCTGTTGAAGACGTTCGCTGGCAAGATCCTGAGGAAAACATTTCAGA
genomic: AGTCGGGAGGAGTCCGAGAGGAGCTTCCCTCGTACTTTACATGCGGATAGgtatgtgaat ... tgttggacagGCCTGCTGTTGAAGACGTTCGCTGGCAAGATCCTGAGGAAAACATTTCAGA
gtatgcagaatcttgctgtgtggtcgttactttttaacagagttttgttggacagGCCTGCTGTTGAAGACGTTCGCTGGCAAGATCCTGAGGAAAACATTTCAGACGACGACGAGGGATGTATACCTGATGAGGACAATACAGACGGACCTAAA
ttttaac putative branch site (score: 14)
ttttgtt putative PPT
ttactttttaa TA-rich tract