1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtaacgaatatgttaaagcaatggcacaccgggttgaagtgaagcaaattccaatatcaattgtctagtttggatcatatagtcaatttcaatgtgtacatattttaacttataattgtcgcacttgttgacagGCGGAAATTACATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACAAATGTTCTTAGCTGGTGATAGTTGTGAATTGCACATTCAGTTGATTAAA
species | Physcomitrella patens |
transcript | PP1S90_95V6.1 |
intron # | 16 |
splice site | 3' |
intron type | U2 |
EST: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAG GCGGAAATTACATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACAEST: gi|18341360|gb|BJ173395.1|BJ173395
genomic: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAGgtaacgaata ... ttgttgacagGCGGAAATTACATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACA
EST: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAG GCGGAAATTACATGTTCTTATCEST: gi|18337995|gb|BJ170019.1|BJ170019
genomic: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAGgtaacgaata ... ttgttgacagGCGGAAATTACATGTTCTTATC
EST: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAG GCGGAAATTACATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACAEST: gi|162191193|gb|FC367871.1|FC367871
genomic: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAGgtaacgaata ... ttgttgacagGCGGAAATTACATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACA
EST: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAG GCGGAAATTGCATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACA
genomic: TGCGGCTCTTTCAAACTAAATTTTTGGACCCACTCCAACGTGCGAACAAGgtaacgaata ... ttgttgacagGCGGAAATTACATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACA
tagtcaatttcaatgtgtacatattttaacttataattgtcgcacttgttgacagGCGGAAATTACATGTTCTTATCAACAGAAATTACAGCAGACCAGTGCTACAAATGTTCTTAGCTGGTGATAGTTGTGAATTGCACATTCAGTTGATTAAA
ttttaac putative branch site (score: 2)
aatgtgtacatatttt TA-rich tract