1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtaaacaaattcggaaccaaccaactattgagacaatttttgtatgcagtctttaagcttacttgcatgaaaagtgtgctcttagattggtaaaatttctacactcttagattggtaaaatttctatcataactggacgtgagttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTACTTGGGGGTGCTTCCGCACTGAACTTTTTTCTCCAATTTTCTCAGACCG
species | Physcomitrella patens |
transcript | PP1S25_21V6.1 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162211075|gb|FC387099.1|FC387099
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162158570|gb|FC334573.1|FC334573
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162276212|gb|FC452904.1|FC452904
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162153221|gb|FC329003.1|FC329003
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162181979|gb|FC356850.1|FC356850
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162168390|gb|FC344704.1|FC344704
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162276525|gb|FC452905.1|FC452905
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162211074|gb|FC387098.1|FC387098
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162257210|gb|FC433086.1|FC433086
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTAEST: gi|162151649|gb|FC327778.1|FC327778
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
EST: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAG GTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
genomic: AAGCAGTTGCTATTGCAAAACAGAAGGCTGGTATAGCTGAAGATCAACAGgtaaacaaat ... agttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTA
ttctacactcttagattggtaaaatttctatcataactggacgtgagttgtgcagGTTTCACTTGTTGAGCTGTCAAGACGACAAGCATCGCCACTCTCTTTATTACTTGGGGGTGCTTCCGCACTGAACTTTTTTCTCCAATTTTCTCAGACCG
tcataac putative branch site (score: 5)
taaaatttctatcata TA-rich tract