1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtgaacatctcatcgttcaatacttgctagtcagaaattatttaagtcatgtttttgtacctgctgagtggaccttcccttgctgtaaatctaggatctatttaccttcacgaggttagttcaaatttgtggatcagacttgtctgaactaaaggttgtgtggcagCTGTGGAAACCAGAATTAGTGTCACTTATATCGTCACACCAGTCAGTGGAAAGAGTGGTGTCTGTGGGGACAATCTTCGCACTGGAACTCCGTGCTAATG
species | Physcomitrella patens |
transcript | PP1S68_291V6.1 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: CTCAAAAAATTTTAATTTGTTACCAGGAGGGCGCCGCCTGAGGGAG CTGTGGAAACCAGAATTAGTGTCACTTATATCGTCACACCAGTCAGTGGGAEST: gi|37835252|gb|BJ593264.1|BJ593264
genomic: CTCAAAAAATTCTAATTTGTTACCAGGAGGGCGCCGCCTGAGGGAGgtgaacatct ... tgtgtggcagCTGTGGAAACCAGAATTAGTGTCACTTATATCGTCACACCAGTCAGTGGAA
EST: TCCCTCAAAAAATTCTAATTTGTTACCAGGAGGGCGCCGCCTGAGGGAG CTGTGGAAACCAGAATTAGTGTCACTTATATCGTCACACCAGTCAGTGGAA
genomic: TCCCTCAAAAAATTCTAATTTGTTACCAGGAGGGCGCCGCCTGAGGGAGgtgaacatct ... tgtgtggcagCTGTGGAAACCAGAATTAGTGTCACTTATATCGTCACACCAGTCAGTGGAA
gaggttagttcaaatttgtggatcagacttgtctgaactaaaggttgtgtggcagCTGTGGAAACCAGAATTAGTGTCACTTATATCGTCACACCAGTCAGTGGAAAGAGTGGTGTCTGTGGGGACAATCTTCGCACTGGAACTCCGTGCTAATG
aactaaa putative branch site (score: 2)
ttcaaattt TA-rich tract