1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' |
...tattgtatgagctgcttgtgcctgcggtcggttttcaattgtggttgagattacctgctgtttgtagactgctgatcaacagtgttcgtttgtgtaacagGGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGATTATCTTTTACAG
species | Physcomitrella patens |
transcript | PP1S28_182V6.1 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAA GGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGATEST: gi|162188987|gb|FC364377.1|FC364377
genomic: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAAgtaagttacc ... tgtgtaacagGGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGAT
EST: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAA GGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGATEST: gi|208387821|gb|DC941390.1|DC941390
genomic: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAAgtaagttacc ... tgtgtaacagGGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGAT
EST: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAA GGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGATEST: gi|67704524|gb|BJ964757.1|BJ964757
genomic: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAAgtaagttacc ... tgtgtaacagGGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGAT
EST: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAA GGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGATEST: gi|162178492|gb|FC354216.1|FC354216
genomic: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAAgtaagttacc ... tgtgtaacagGGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGAT
EST: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGAATGATAAA GGAACTCCTTATCTCTTTCCGGTGTGCG
genomic: AAGGAATGGAGGGACCCCCAGAAAGGCACGATGACAGGAGGGATGATAAAgtaagttacc ... tgtgtaacagGGAACTCCTTATCTCTTTCCGGTGTGCG
tgagattacctgctgtttgtagactgctgatcaacagtgttcgtttgtgtaacagGGAACTCCTTATCTCTTTCCGGTGTGCGACCGGTCAAAAGCCACTTCGGATTATCTTTTACAG
tgctgat putative branch site (score: 5)
ttcgttt putative PPT