1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
gtaactgcctctaccttattgtctcattgcttttaggagaatgattcttcatcgctgccgtacttcccttgttttttggctggctgtacctttgtatggattagaaacgtgttgggtgattaaatgttgattaaatatgtttatgttttatcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
species | Physcomitrella patens |
transcript | PP1S192_39V6.4 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTCCGAAGGGATGAATTGCGGEST: gi|37821380|gb|BJ579446.1|BJ579446
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|37842189|gb|BJ600197.1|BJ600197
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|37851014|gb|BJ609022.1|BJ609022
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|37841660|gb|BJ599668.1|BJ599668
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|208381262|gb|DC919152.1|DC919152
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|162173094|gb|FC349200.1|FC349200
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|37850441|gb|BJ608449.1|BJ608449
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|37843663|gb|BJ601671.1|BJ601671
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|7584227|gb|AW700124.1|AW700124
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|162279045|gb|FC455072.1|FC455072
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGGEST: gi|162227769|gb|FC402697.1|FC402697
genomic: TACCAAGATATTGTTATTCCTGAAGCTTATGAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
EST: GAGCGTCTAATACTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
genomic: GAGCGTCTAATACTTGATACgtaactgcct ... tcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
aacgtgttgggtgattaaatgttgattaaatatgtttatgttttatcatgcgcagTATTCGTGGGGATCAACAACATTTTGTGCGAAGGGATGAATTGCGG
tgttgat putative branch site (score: 4)
ttttatc putative PPT
attaaatgttgattaa TA-rich tract