1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...ttttatttccagccgttaggacgtcaagtccaagtgcattaactctgcttttgaattcttactgaagagacaaagcgattgtttacctgtttgcatgcagACTGTCTTTGAGGCAGACAGAGCCAAAGAAGGTTTCTACATTCGCTCAGGCATTGTTGTGATAGCCAAAAACGCTACAATCAAGGACAACACAGTGATTT
species | Physcomitrella patens |
transcript | PP1S175_26V6.1 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: TTGATAAGAATGCGAAGATAGGGAAGAACGTCGTCATTGCCAACACAGAT ACTGTCTTTGAGGCAGACAGAGCCAAAGAAGGTTTCTACATTCGCTCAGGCEST: gi|37845431|gb|BJ603439.1|BJ603439
genomic: TTGATAAGAATGCGAAGATAGGGAAGAACGTCGTCATTGCCAACACAGATgtatgaaaat ... ttgcatgcagACTGTCTTTGAGGCAGACAGAGCCAAAGAAGGTTTCTACATTCGCTCAGGC
EST: TTGATAAGAATGCGAAGATAGGGAAGAACGTCGTCATTGCCAACACAGAT ACTGTCTTTGAGGCAGACAGAGCCAAAGAAGGTTTCTACATTCGCTCAGGC
genomic: TTGATAAGAATGCGAAGATAGGGAAGAACGTCGTCATTGCCAACACAGATgtatgaaaat ... ttgcatgcagACTGTCTTTGAGGCAGACAGAGCCAAAGAAGGTTTCTACATTCGCTCAGGC
tgcttttgaattcttactgaagagacaaagcgattgtttacctgtttgcatgcagACTGTCTTTGAGGCAGACAGAGCCAAAGAAGGTTTCTACATTCGCTCAGGCATTGTTGTGATAGCCAAAAACGCTACAATCAAGGACAACACAGTGATTT
ttcttac putative branch site (score: 18)
cctgttt putative PPT
aattctta TA-rich tract