1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
...gtatctcgtctgtgtgattttgcgccttcactaatgaatggctggttgacgttattccaagtgctactctgactggggaccttgaattgtgattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGCCAAGGCTGTGGCTGGCATGCTCATGTTTGCAACGGTCTCAGGTATCTT
species | Physcomitrella patens |
transcript | PP1S105_42V6.2 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: AGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|162189732|gb|FC366786.1|FC366786
genomic: AGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGACTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|37839867|gb|BJ597875.1|BJ597875
genomic: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGGCAGTCATCTCTCCAATNGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|37842791|gb|BJ600799.1|BJ600799
genomic: TGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGEST: gi|162185003|gb|FC362449.1|FC362449
genomic: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
EST: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTG GTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
genomic: TGAGATGATCAAACCAGGGGCTCTGGCAGTCATCTCTCCAATTGTAATTGgtaatgcaac ... gattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAG
ttgacgttattccaagtgctactctgactggggaccttgaattgtgattgtttagGTCTTGTTTTTAGGCTTGTTGGGCAAGCTACAGATCAGCCGCTGCTGGGAGCCAAGGCTGTGGCTGGCATGCTCATGTTTGCAACGGTCTCAGGTATCTT
ctctgac putative branch site (score: 1)
attgttta TA-rich tract