1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtgtgtaatgtttcacaccactgctgttttgctgggtgtgctgtaaaagcttatgtaagactgaaatatcttgattcacatttacttgttttctagaatgaaacagtgtagtttgcagattattacgatgatttaatttccaacaatgagtgcaggtaggtttgtattaattctgtcttttgttttgtacacagGTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAGCCTGACAAACCTGCAATTAATGCTTCGCATTTGAAACTCTAGGTTTTAT
species | Physcomitrella patens |
transcript | PP1S102_17V6.1 |
intron # | 14 |
splice site | 3' |
intron type | U2 |
EST: CAACACCCGTTCCAGAGAAACGGACATCATCTTTCTCAAAATCTGCCAAG GTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAGEST: gi|208382665|gb|DC923251.1|DC923251
genomic: CAACACCCGTTCCAGAGAAACGGACATCATCTTTCTCAAAATCTGCCAAGgtgtgtaatg ... ttgtacacagGTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAG
EST: CAACACCCGTTCCAGAGAAACGGACATCATCTTTCTCAAAATCTGCCAAG GTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAGEST: gi|208347132|gb|DC909388.1|DC909388
genomic: CAACACCCGTTCCAGAGAAACGGACATCATCTTTCTCAAAATCTGCCAAGgtgtgtaatg ... ttgtacacagGTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAG
EST: CAACACCCGTTCCAGAGAAACGGACATCATCTTTCTCAAAATCTGCCAAG GTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAG
genomic: CAACACCCGTTCCAGAGAAACGGACATCATCTTTCTCAAAATCTGCCAAGgtgtgtaatg ... ttgtacacagGTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAG
ccaacaatgagtgcaggtaggtttgtattaattctgtcttttgttttgtacacagGTGTTTGCTGCACTTGATGTTGCCAAAGAGAAGGGCAATAAGCCTGATAAGCCTGACAAACCTGCAATTAATGCTTCGCATTTGAAACTCTAGGTTTTAT
tattaat putative branch site (score: 1)
ttctgtcttttgtttt CT-rich tract
tttgtattaattct TA-rich tract