1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...atgcttcgcagttactattcattcactcgtattcatgcttgagggcttctttaagattctactctaatttactcatgatccaactctcatatgcgggcagGAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTTCTCACTGATGCCCTGGTTGCACACTTACAGCCGATTCAG
species | Physcomitrella patens |
transcript | PP1S5_195V6.1 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAG GAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTTEST: gi|162232153|gb|FC407729.1|FC407729
genomic: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAGgtataccaca ... atgcgggcagGAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTT
EST: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAG GAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTTEST: gi|37824470|gb|BJ582536.1|BJ582536
genomic: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAGgtataccaca ... atgcgggcagGAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTT
EST: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAG GAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTTEST: gi|208358963|gb|DC950140.1|DC950140
genomic: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAGgtataccaca ... atgcgggcagGAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTT
EST: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAG GAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTTEST: gi|162159330|gb|FC335144.1|FC335144
genomic: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAGgtataccaca ... atgcgggcagGAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTT
EST: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAG GAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTT
genomic: GTAACAACCTATTATCAATCTATCAACAAGTTACCGGGAAGACTCAGCAGgtataccaca ... atgcgggcagGAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTT
cttctttaagattctactctaatttactcatgatccaactctcatatgcgggcagGAGGTAATTGCTGAATGTGGAGAAATGAGCTGGGGACAGTTTAAGCCAGTTCTCACTGATGCCCTGGTTGCACACTTACAGCCGATTCAG
ctctaat putative branch site (score: 19)
tctaattta TA-rich tract