1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
...tcagcttgtcgatgatacgcattaactgcaattcgtaacgggttgcttatgttgtgttatgtcgagtttcaattgattgttggtaattgatatgcaacagAGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCCCGCCTACTATCATCGACGCACCAACCCAATTTTTTGCGGTATGAGAAAG
species | Physcomitrella patens |
transcript | PP1S327_30V6.2 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: GGTTTACAGCTGGTCCTGTCAACAACCGCCATTGCTACATCCCTATCTCT AGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCCEST: gi|15261837|gb|BI437147.1|BI437147
genomic: GGTTTACAGCTGGTCCTGTCAACAACCGCCATTGCTACATCCCTATCTCTgtacagatat ... tatgcaacagAGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCC
EST: AACAACCGCCATTGCTACATCCCTATCTCT AGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCCEST: gi|162194271|gb|FC371067.1|FC371067
genomic: AACAACCGCCATTGCTACATCCCTATCTCTgtacagatat ... tatgcaacagAGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCC
EST: GGTTTACAGCTGGTCCTGTCAACAACCGCCATTGCTACATCCCTATCTCT AGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCC
genomic: GGTTTACAGCTGGTCCTGTCAACAACCGCCATTGCTACATCCCTATCTCTgtacagatat ... tatgcaacagAGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCC
cttatgttgtgttatgtcgagtttcaattgattgttggtaattgatatgcaacagAGAGCTGTTGAGAAACAGAGGCATGTAAATACAAGCGATCGTATGTGGGCCCGCCTACTATCATCGACGCACCAACCCAATTTTTTGCGGTATGAGAAAG
aattgat putative branch site (score: 2)
taattgatat TA-rich tract