1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtaaattcttctgccctcctgtctcattcatttcaagatggctatattcaatcatgtgtgcaattctgttgctttttcgttgcttgtgcctcgatagaaaccagaaacatgtttggttaaaatattgatctagacaattcgtacttgggcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
species | Physcomitrella patens |
transcript | PP1S222_130V6.3 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGGEST: gi|162211596|gb|FC387676.1|FC387676
genomic: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATACgtaaattctt ... gcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
EST: AGCGCCTGCTTCTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGGEST: gi|162191926|gb|FC366931.1|FC366931
genomic: AGCGCCTGCTTCTTGATACgtaaattctt ... gcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
EST: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGGEST: gi|15730173|gb|BI741714.1|BI741714
genomic: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATACgtaaattctt ... gcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
EST: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGGEST: gi|67694438|gb|BJ954671.1|BJ954671
genomic: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATACgtaaattctt ... gcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
EST: TATCAAGATATTGTTANTCCTGAGGCTTATGAGCGCCTGCTTCTTGATAC TNTTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGGEST: gi|162280090|gb|FC456484.1|FC456484
genomic: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATACgtaaattctt ... gcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
EST: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGGEST: gi|162208214|gb|FC384318.1|FC384318
genomic: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATACgtaaattctt ... gcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
EST: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATAC TATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
genomic: TATCAAGATATTGTTATTCCTGAGGCTTATGAGCGCCTGCTTCTTGATACgtaaattctt ... gcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
gaaacatgtttggttaaaatattgatctagacaattcgtacttgggcttgtgcagTATTCGTGGGGATCAACAACATTTTGTGCGCAGGGATGAATTGCGG
tattgat putative branch site (score: 3)
ttaaaatattgatcta TA-rich tract